Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 RN7SL510P-201ENST00000581311 263 ntBASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 Z69720.1-201ENST00000601483 472 ntBASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 AC233702.3-201ENST00000578656 1387 ntBASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.14■□□□□ 0.49
HS3ST3A1Q9Y663 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AC004870.1-201ENST00000315132 882 ntBASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AC113404.2-201ENST00000507884 177 ntBASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AL592071.1-201ENST00000611956 408 ntBASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 MYLKP1-201ENST00000509077 1580 ntBASIC18.13■□□□□ 0.49
HS3ST3A1Q9Y663 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 FAAHP1-202ENST00000446499 1238 ntBASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 UNC93B7-201ENST00000509439 705 ntBASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 AC091304.2-201ENST00000564639 760 ntBASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.12■□□□□ 0.49
HS3ST3A1Q9Y663 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
HS3ST3A1Q9Y663 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.11■□□□□ 0.49
HS3ST3A1Q9Y663 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.11■□□□□ 0.49
HS3ST3A1Q9Y663 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
HS3ST3A1Q9Y663 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms