Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 AL359075.1-203ENST00000462729 1002 ntBASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.73■□□□□ 0.91
COL4A3BPQ9Y5P4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
COL4A3BPQ9Y5P4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 MIR564-202ENST00000385049 94 ntBASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL4A3BPQ9Y5P4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
COL4A3BPQ9Y5P4 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
COL4A3BPQ9Y5P4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 AL031133.1-201ENST00000406807 723 ntBASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 KRT18P38-201ENST00000449496 1282 ntBASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.7■□□□□ 0.9
COL4A3BPQ9Y5P4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms