Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 NOC2LP1-202ENST00000452600 2235 ntBASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 AC117947.1-201ENST00000427448 529 ntBASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 COX11P1-201ENST00000489116 835 ntBASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 WWOX-216ENST00000569818 525 ntBASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.52■□□□□ 0.4
PCDHGB6Q9Y5F9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.52■□□□□ 0.39
PCDHGB6Q9Y5F9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB6Q9Y5F9 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB6Q9Y5F9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDHGB6Q9Y5F9 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDHGB6Q9Y5F9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 AC141257.4-201ENST00000634557 245 ntBASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 AC136944.6-201ENST00000634818 245 ntBASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDHGB6Q9Y5F9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AC141586.3-201ENST00000562166 1838 ntBASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AC087388.1-201ENST00000571370 1112 ntBASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHGB6Q9Y5F9 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 TSPY5P-201ENST00000426936 936 ntBASIC17.49■□□□□ 0.39
PCDHGB6Q9Y5F9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms