Protein–RNA interactions for Protein: Q9UJT0

TUBE1, Tubulin epsilon chain, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1Q9UJT0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 AC126763.1-201ENST00000552015 2118 ntBASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 AL031432.5-201ENST00000641059 760 ntBASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 KRT8P45-201ENST00000414328 1447 ntBASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
TUBE1Q9UJT0 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.17■□□□□ 0.98
TUBE1Q9UJT0 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 AL023973.1-201ENST00000624619 620 ntBASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 NOC2LP2-201ENST00000407594 1944 ntBASIC21.16■□□□□ 0.98
TUBE1Q9UJT0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 MTMR9LP-203ENST00000426597 1545 ntBASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 AL031133.1-201ENST00000406807 723 ntBASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 NFYC-AS1-201ENST00000606277 1687 ntBASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TUBE1Q9UJT0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBE1Q9UJT0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBE1Q9UJT0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TUBE1Q9UJT0 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
TUBE1Q9UJT0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms