Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 ZNF444P1-201ENST00000559497 298 ntBASIC19.81■□□□□ 0.76
SIX4Q9UIU6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 AL121956.5-201ENST00000625261 221 ntBASIC19.81■□□□□ 0.76
SIX4Q9UIU6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.81■□□□□ 0.76
SIX4Q9UIU6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 AC009102.3-201ENST00000623118 1491 ntBASIC19.8■□□□□ 0.76
SIX4Q9UIU6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
SIX4Q9UIU6 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
SIX4Q9UIU6 AC120498.9-201ENST00000339021 3867 ntBASIC19.78■□□□□ 0.76
SIX4Q9UIU6 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AL136038.3-201ENST00000561909 1096 ntBASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AC009065.1-201ENST00000564055 1225 ntBASIC19.78■□□□□ 0.76
SIX4Q9UIU6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 AC073592.3-201ENST00000625118 1834 ntBASIC19.78■□□□□ 0.76
SIX4Q9UIU6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SIX4Q9UIU6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 AC005332.1-201ENST00000577698 1310 ntBASIC19.77■□□□□ 0.76
SIX4Q9UIU6 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.77■□□□□ 0.76
SIX4Q9UIU6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms