Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
COMMD3Q9UBI1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 AP006587.1-201ENST00000534129 1502 ntBASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 AC069236.1-201ENST00000604339 616 ntBASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COMMD3Q9UBI1 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 KRT17P1-201ENST00000399211 1546 ntBASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 YBX1P10-201ENST00000444752 975 ntBASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 AC008694.1-202ENST00000636953 945 ntBASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COMMD3Q9UBI1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COMMD3Q9UBI1 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms