Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 AC034232.1-201ENST00000506026 1064 ntBASIC17.2■□□□□ 0.34
HPF1Q9NWY4 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
HPF1Q9NWY4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC116562.4-201ENST00000641316 2276 ntBASIC17.19■□□□□ 0.34
HPF1Q9NWY4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC024243.1-201ENST00000609234 778 ntBASIC17.19■□□□□ 0.34
HPF1Q9NWY4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 AC112497.1-201ENST00000624824 639 ntBASIC17.19■□□□□ 0.34
HPF1Q9NWY4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
HPF1Q9NWY4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 STARP1-201ENST00000397973 869 ntBASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AL671277.2-201ENST00000458060 996 ntBASIC17.18■□□□□ 0.34
HPF1Q9NWY4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AC098818.2-201ENST00000564925 2320 ntBASIC17.18■□□□□ 0.34
HPF1Q9NWY4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HPF1Q9NWY4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms