Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 AL160286.2-201ENST00000567150 934 ntBASIC16.94■□□□□ 0.3
CLN6Q9NWW5 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 IKBKGP1-201ENST00000612193 1073 ntBASIC16.94■□□□□ 0.3
CLN6Q9NWW5 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLN6Q9NWW5 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AC093677.2-201ENST00000600169 1863 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 SLC29A4P1-201ENST00000398760 971 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AC097658.1-201ENST00000475555 843 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 PNMA6B-201ENST00000538162 1200 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AL137784.2-201ENST00000607332 1000 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AC120498.8-201ENST00000614275 531 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AC068587.9-201ENST00000641814 219 ntBASIC16.93■□□□□ 0.3
CLN6Q9NWW5 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.93■□□□□ 0.3
CLN6Q9NWW5 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC006970.2-201ENST00000450065 779 ntBASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 MIR4758-201ENST00000577688 71 ntBASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC060766.5-201ENST00000590539 871 ntBASIC16.92■□□□□ 0.3
CLN6Q9NWW5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.92■□□□□ 0.3
CLN6Q9NWW5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms