Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TMEM248Q9NWD8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TMEM248Q9NWD8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SDHAP2-201ENST00000455183 2001 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PVRIG2P-201ENST00000435460 978 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 HYMAI.1-201ENST00000620949 238 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 AL590326.2-201ENST00000625139 305 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 AC005082.1-201ENST00000413042 2259 ntBASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.91■□□□□ 0.62
TMEM248Q9NWD8 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 AC079602.3-201ENST00000623931 403 ntBASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
TMEM248Q9NWD8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
TMEM248Q9NWD8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TMEM248Q9NWD8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 AC112907.2-201ENST00000448639 330 ntBASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.89■□□□□ 0.61
TMEM248Q9NWD8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms