Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AF186192.3-201ENST00000583427 947 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AC233702.5-201ENST00000584107 538 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AC073195.1-201ENST00000607241 877 ntBASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LIN7CQ9NUP9 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 DET1-205ENST00000558413 583 ntTSL 4 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 MYC-208ENST00000641036 567 ntBASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
LIN7CQ9NUP9 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AL445675.2-201ENST00000620291 557 ntBASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 HLA-A-209ENST00000638375 975 ntBASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AL133373.2-201ENST00000623187 2828 ntBASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
LIN7CQ9NUP9 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 RPS2P4-201ENST00000476944 856 ntBASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.42■□□□□ 0.06
LIN7CQ9NUP9 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms