Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
NEUROD4Q9HD90 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 AC008556.1-201ENST00000610908 2040 ntBASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 AC097488.1-201ENST00000507834 756 ntBASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 ABALON-201ENST00000629058 1903 ntBASIC17.52■□□□□ 0.4
NEUROD4Q9HD90 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.52■□□□□ 0.39
NEUROD4Q9HD90 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 AP000593.1-201ENST00000393668 712 ntBASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 AL355355.2-201ENST00000442321 338 ntBASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 REXO1L10P-201ENST00000615707 1290 ntBASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
NEUROD4Q9HD90 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 MYLKP1-201ENST00000509077 1580 ntBASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 AL023284.2-201ENST00000405850 579 ntBASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 AP005242.2-201ENST00000580065 1175 ntBASIC17.5■□□□□ 0.39
NEUROD4Q9HD90 AC026471.5-201ENST00000615068 467 ntBASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms