Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 AL139384.1-201ENST00000612143 3047 ntBASIC19.46■□□□□ 0.71
CD248Q9HCU0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CD248Q9HCU0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CD248Q9HCU0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 TSPY5P-201ENST00000426936 936 ntBASIC19.45■□□□□ 0.7
CD248Q9HCU0 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 COX11P1-201ENST00000489116 835 ntBASIC19.45■□□□□ 0.7
CD248Q9HCU0 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.45■□□□□ 0.7
CD248Q9HCU0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CD248Q9HCU0 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 AC011558.1-201ENST00000623459 338 ntBASIC19.44■□□□□ 0.7
CD248Q9HCU0 AL358472.4-201ENST00000633140 710 ntBASIC19.44■□□□□ 0.7
CD248Q9HCU0 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CD248Q9HCU0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.44■□□□□ 0.7
CD248Q9HCU0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 LINC01238-205ENST00000567549 1107 ntBASIC19.43■□□□□ 0.7
CD248Q9HCU0 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CD248Q9HCU0 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CD248Q9HCU0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms