Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.24■□□□□ 0.19
CDH20Q9HBT6 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 AC036111.1-201ENST00000533973 1582 ntBASIC16.23■□□□□ 0.19
CDH20Q9HBT6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 AC012306.2-201ENST00000609350 630 ntBASIC16.23■□□□□ 0.19
CDH20Q9HBT6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
CDH20Q9HBT6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 KRT8P45-201ENST00000414328 1447 ntBASIC16.22■□□□□ 0.19
CDH20Q9HBT6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 AC113347.1-201ENST00000413321 391 ntBASIC16.22■□□□□ 0.19
CDH20Q9HBT6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 CR769767.2-201ENST00000622735 460 ntBASIC16.22■□□□□ 0.19
CDH20Q9HBT6 AC008556.1-201ENST00000610908 2040 ntBASIC16.22■□□□□ 0.19
CDH20Q9HBT6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CDH20Q9HBT6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CDH20Q9HBT6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH20Q9HBT6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CDH20Q9HBT6 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH20Q9HBT6 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CDH20Q9HBT6 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CDH20Q9HBT6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CDH20Q9HBT6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms