Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC16.2■□□□□ 0.18
ELL3Q9HB65 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.2■□□□□ 0.18
ELL3Q9HB65 C1QL1P1-201ENST00000568105 661 ntBASIC16.2■□□□□ 0.18
ELL3Q9HB65 HLA-A-209ENST00000638375 975 ntBASIC16.2■□□□□ 0.18
ELL3Q9HB65 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ELL3Q9HB65 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ELL3Q9HB65 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.2■□□□□ 0.18
ELL3Q9HB65 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ELL3Q9HB65 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.2■□□□□ 0.18
ELL3Q9HB65 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ELL3Q9HB65 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
ELL3Q9HB65 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.2■□□□□ 0.18
ELL3Q9HB65 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.19■□□□□ 0.18
ELL3Q9HB65 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ELL3Q9HB65 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ELL3Q9HB65 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 AC135050.7-201ENST00000624508 2218 ntBASIC16.18■□□□□ 0.18
ELL3Q9HB65 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 TSPY23P-201ENST00000440136 739 ntBASIC16.18■□□□□ 0.18
ELL3Q9HB65 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ELL3Q9HB65 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
ELL3Q9HB65 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
ELL3Q9HB65 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.17■□□□□ 0.18
ELL3Q9HB65 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms