Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.85■□□□□ 0.61
LRRC40Q9H9A6 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 MIR4674-201ENST00000582457 87 ntBASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.84■□□□□ 0.61
LRRC40Q9H9A6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC40Q9H9A6 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ABALON-201ENST00000629058 1903 ntBASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 CCR12P-201ENST00000446203 998 ntBASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 AL353719.1-201ENST00000566847 864 ntBASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
LRRC40Q9H9A6 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 MIR1238-201ENST00000408483 83 ntBASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 AL390955.1-201ENST00000428694 934 ntBASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 AP003041.3-201ENST00000527151 707 ntBASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 AL355075.4-201ENST00000554988 638 ntBASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC40Q9H9A6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms