Protein–RNA interactions for Protein: Q9H6F2

TMEM38A, Trimeric intracellular cation channel type A, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38AQ9H6F2 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
TMEM38AQ9H6F2 AL135905.2-201ENST00000584934 1404 ntBASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TMEM38AQ9H6F2 FLJ13224-201ENST00000313737 1514 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 CA15P1-201ENST00000481698 905 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 MIR4651-201ENST00000582622 73 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 GPAT2P1-201ENST00000444924 1672 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 REXO1L9P-201ENST00000604264 2108 ntBASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TMEM38AQ9H6F2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 GNAS-203ENST00000306120 1878 ntBASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 KRT8P50-201ENST00000562022 1438 ntBASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AP000997.3-201ENST00000623333 2250 ntBASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AC116562.2-201ENST00000507042 360 ntBASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 AL359736.2-201ENST00000621992 437 ntBASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.25■□□□□ 0.35
TMEM38AQ9H6F2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 GMCL1P1-201ENST00000463439 1581 ntBASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TMEM38AQ9H6F2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms