Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 MIR149-201ENST00000384879 89 ntBASIC21.85■■□□□ 1.09
RNF41Q9H4P4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 KRT18P38-201ENST00000449496 1282 ntBASIC21.85■■□□□ 1.09
RNF41Q9H4P4 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 AC010331.1-201ENST00000611423 582 ntBASIC21.85■■□□□ 1.09
RNF41Q9H4P4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.85■■□□□ 1.09
RNF41Q9H4P4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.84■■□□□ 1.09
RNF41Q9H4P4 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 AL138781.2-201ENST00000617896 1843 ntBASIC21.83■■□□□ 1.09
RNF41Q9H4P4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 COPE-203ENST00000351079 907 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 NTF6B-201ENST00000591913 560 ntBASIC21.83■■□□□ 1.09
RNF41Q9H4P4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC21.83■■□□□ 1.09
RNF41Q9H4P4 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.09
RNF41Q9H4P4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.83■■□□□ 1.08
RNF41Q9H4P4 AC009102.3-201ENST00000623118 1491 ntBASIC21.83■■□□□ 1.08
RNF41Q9H4P4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 AC112907.2-201ENST00000448639 330 ntBASIC21.82■■□□□ 1.08
RNF41Q9H4P4 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
RNF41Q9H4P4 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 PVRIG2P-201ENST00000435460 978 ntBASIC21.81■■□□□ 1.08
RNF41Q9H4P4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.81■■□□□ 1.08
RNF41Q9H4P4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RNF41Q9H4P4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 AC004408.2-201ENST00000623613 2777 ntBASIC21.8■■□□□ 1.08
RNF41Q9H4P4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
RNF41Q9H4P4 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms