Protein–RNA interactions for Protein: Q9H078

CLPB, Caseinolytic peptidase B protein homolog, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPBQ9H078 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CLPBQ9H078 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.64■□□□□ 0.57
CLPBQ9H078 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.64■□□□□ 0.57
CLPBQ9H078 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.64■□□□□ 0.57
CLPBQ9H078 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.64■□□□□ 0.57
CLPBQ9H078 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CLPBQ9H078 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.64■□□□□ 0.57
CLPBQ9H078 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC18.64■□□□□ 0.57
CLPBQ9H078 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.64■□□□□ 0.57
CLPBQ9H078 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
CLPBQ9H078 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
CLPBQ9H078 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.64■□□□□ 0.57
CLPBQ9H078 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.64■□□□□ 0.57
CLPBQ9H078 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CLPBQ9H078 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CLPBQ9H078 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CLPBQ9H078 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPBQ9H078 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 AC026471.1-201ENST00000564629 3026 ntBASIC18.63■□□□□ 0.57
CLPBQ9H078 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
CLPBQ9H078 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.63■□□□□ 0.57
CLPBQ9H078 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.63■□□□□ 0.57
CLPBQ9H078 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
CLPBQ9H078 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.63■□□□□ 0.57
CLPBQ9H078 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPBQ9H078 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.63■□□□□ 0.57
CLPBQ9H078 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.63■□□□□ 0.57
CLPBQ9H078 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.63■□□□□ 0.57
CLPBQ9H078 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
CLPBQ9H078 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CLPBQ9H078 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CLPBQ9H078 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.62■□□□□ 0.57
CLPBQ9H078 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 AC009947.2-201ENST00000444014 672 ntBASIC18.62■□□□□ 0.57
CLPBQ9H078 AL359075.1-203ENST00000462729 1002 ntBASIC18.62■□□□□ 0.57
CLPBQ9H078 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.62■□□□□ 0.57
CLPBQ9H078 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.62■□□□□ 0.57
CLPBQ9H078 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.62■□□□□ 0.57
CLPBQ9H078 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.62■□□□□ 0.57
CLPBQ9H078 AC068587.9-201ENST00000641814 219 ntBASIC18.62■□□□□ 0.57
CLPBQ9H078 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CLPBQ9H078 RCC2P3-201ENST00000418112 1537 ntBASIC18.62■□□□□ 0.57
CLPBQ9H078 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CLPBQ9H078 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.62■□□□□ 0.57
CLPBQ9H078 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPBQ9H078 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLPBQ9H078 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CLPBQ9H078 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPBQ9H078 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CLPBQ9H078 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CLPBQ9H078 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CLPBQ9H078 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
CLPBQ9H078 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CLPBQ9H078 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLPBQ9H078 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CLPBQ9H078 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CLPBQ9H078 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPBQ9H078 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.61■□□□□ 0.57
CLPBQ9H078 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms