Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AL096828.2-201ENST00000567259 1965 ntBASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 HTR7P1-201ENST00000538670 1336 ntBASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 EMC4-208ENST00000559078 599 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC092723.2-201ENST00000624955 793 ntBASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC106820.2-201ENST00000563775 3264 ntBASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC9.41□□□□□ -0.9
KRTAP3-1Q9BYR8 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 KRT18P41-201ENST00000518924 1277 ntBASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 AC008403.3-201ENST00000598924 454 ntBASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC9.4□□□□□ -0.9
KRTAP3-1Q9BYR8 PFKL-212ENST00000628044 129 ntTSL 3 BASIC9.4□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms