Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TWNKQ96RR1 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 AC092597.1-201ENST00000487352 616 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 AC010331.1-201ENST00000611423 582 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 HYMAI.1-201ENST00000620949 238 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 MYC-208ENST00000641036 567 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TWNKQ96RR1 AC009113.1-201ENST00000570267 2443 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 RNF165-205ENST00000588679 2904 ntBASIC19.65■□□□□ 0.74
TWNKQ96RR1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TWNKQ96RR1 SDHAP2-201ENST00000455183 2001 ntBASIC19.64■□□□□ 0.74
TWNKQ96RR1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TWNKQ96RR1 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TWNKQ96RR1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
TWNKQ96RR1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 HOMER2P1-201ENST00000455653 964 ntBASIC19.64■□□□□ 0.73
TWNKQ96RR1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 NTF6B-201ENST00000591913 560 ntBASIC19.64■□□□□ 0.73
TWNKQ96RR1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
TWNKQ96RR1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
TWNKQ96RR1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 AC073592.3-201ENST00000625118 1834 ntBASIC19.63■□□□□ 0.73
TWNKQ96RR1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 MIR1224-201ENST00000408193 85 ntBASIC19.63■□□□□ 0.73
TWNKQ96RR1 AC112907.2-201ENST00000448639 330 ntBASIC19.63■□□□□ 0.73
TWNKQ96RR1 AC092647.4-201ENST00000457211 535 ntBASIC19.63■□□□□ 0.73
TWNKQ96RR1 MIR3180-4-201ENST00000582223 153 ntBASIC19.63■□□□□ 0.73
TWNKQ96RR1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TWNKQ96RR1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TWNKQ96RR1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TWNKQ96RR1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TWNKQ96RR1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TWNKQ96RR1 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.62■□□□□ 0.73
TWNKQ96RR1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
TWNKQ96RR1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TWNKQ96RR1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TWNKQ96RR1 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms