Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 AC008556.1-201ENST00000610908 2040 ntBASIC17.6■□□□□ 0.41
BBS4Q96RK4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.6■□□□□ 0.41
BBS4Q96RK4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
BBS4Q96RK4 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 AL499627.1-201ENST00000569373 2188 ntBASIC17.59■□□□□ 0.41
BBS4Q96RK4 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 GPAT2P1-201ENST00000444924 1672 ntBASIC17.59■□□□□ 0.41
BBS4Q96RK4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 AC079598.2-202ENST00000546624 1451 ntBASIC17.59■□□□□ 0.41
BBS4Q96RK4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 MIR1238-201ENST00000408483 83 ntBASIC17.59■□□□□ 0.41
BBS4Q96RK4 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.59■□□□□ 0.41
BBS4Q96RK4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
BBS4Q96RK4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
BBS4Q96RK4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
BBS4Q96RK4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 MIR4497-201ENST00000583208 89 ntBASIC17.58■□□□□ 0.4
BBS4Q96RK4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 NEFHP1-201ENST00000412845 2629 ntBASIC17.58■□□□□ 0.4
BBS4Q96RK4 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
BBS4Q96RK4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
BBS4Q96RK4 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.57■□□□□ 0.4
BBS4Q96RK4 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 AL390955.1-201ENST00000428694 934 ntBASIC17.57■□□□□ 0.4
BBS4Q96RK4 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 AL355075.4-201ENST00000554988 638 ntBASIC17.57■□□□□ 0.4
BBS4Q96RK4 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 FITM1-202ENST00000559294 800 ntBASIC17.57■□□□□ 0.4
BBS4Q96RK4 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.57■□□□□ 0.4
BBS4Q96RK4 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
BBS4Q96RK4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms