Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC15.42■□□□□ 0.06
GAFA1Q96PS6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 YBX1P2-201ENST00000489612 999 ntBASIC15.41■□□□□ 0.06
GAFA1Q96PS6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 AL441883.1-201ENST00000566170 1045 ntBASIC15.41■□□□□ 0.06
GAFA1Q96PS6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 AL163051.1-201ENST00000569214 1512 ntBASIC15.41■□□□□ 0.06
GAFA1Q96PS6 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.41■□□□□ 0.06
GAFA1Q96PS6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 AC011558.1-201ENST00000623459 338 ntBASIC15.4■□□□□ 0.06
GAFA1Q96PS6 AL031432.5-201ENST00000641059 760 ntBASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
GAFA1Q96PS6 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 TMPOP1-202ENST00000424642 1267 ntBASIC15.39■□□□□ 0.05
GAFA1Q96PS6 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 KRT18P21-201ENST00000515767 1272 ntBASIC15.39■□□□□ 0.05
GAFA1Q96PS6 CD81-212ENST00000526072 1172 ntTSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 MIR3180-4-201ENST00000582223 153 ntBASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
GAFA1Q96PS6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms