Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF428Q96B54 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
ZNF428Q96B54 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF428Q96B54 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF428Q96B54 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
ZNF428Q96B54 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF428Q96B54 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
ZNF428Q96B54 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 IER3-202ENST00000376377 1350 ntBASIC23.81■■□□□ 1.4
ZNF428Q96B54 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 GAD2-202ENST00000376248 680 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 AC009065.1-201ENST00000564055 1225 ntBASIC23.81■■□□□ 1.4
ZNF428Q96B54 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC23.81■■□□□ 1.4
ZNF428Q96B54 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
ZNF428Q96B54 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 AL163051.1-201ENST00000569214 1512 ntBASIC23.8■■□□□ 1.4
ZNF428Q96B54 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 SPDYE13P-201ENST00000445314 798 ntBASIC23.8■■□□□ 1.4
ZNF428Q96B54 SEC1P-202ENST00000473944 940 ntBASIC23.8■■□□□ 1.4
ZNF428Q96B54 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 PTK2-216ENST00000519881 863 ntTSL 3 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 AL031432.5-201ENST00000641059 760 ntBASIC23.8■■□□□ 1.4
ZNF428Q96B54 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.8■■□□□ 1.4
ZNF428Q96B54 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
ZNF428Q96B54 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 HOMER2P1-201ENST00000455653 964 ntBASIC23.79■■□□□ 1.4
ZNF428Q96B54 AC126763.1-201ENST00000552015 2118 ntBASIC23.79■■□□□ 1.4
ZNF428Q96B54 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 AL121894.2-201ENST00000602977 491 ntBASIC23.79■■□□□ 1.4
ZNF428Q96B54 AP000550.4-202ENST00000639755 178 ntBASIC23.79■■□□□ 1.4
ZNF428Q96B54 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 STX6-204ENST00000542060 4809 ntTSL 2 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC23.79■■□□□ 1.4
ZNF428Q96B54 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
ZNF428Q96B54 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 AC090164.3-201ENST00000610780 2143 ntBASIC23.78■■□□□ 1.4
ZNF428Q96B54 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
ZNF428Q96B54 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC23.78■■□□□ 1.4
ZNF428Q96B54 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms