Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 PVRIG2P-201ENST00000435460 978 ntBASIC21.81■■□□□ 1.08
STAG1Q8WVM7 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 AC083849.1-201ENST00000615227 514 ntBASIC21.81■■□□□ 1.08
STAG1Q8WVM7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 WIZP1-201ENST00000531444 2299 ntBASIC21.81■■□□□ 1.08
STAG1Q8WVM7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
STAG1Q8WVM7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 AC073592.3-201ENST00000625118 1834 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 SDHAP2-201ENST00000455183 2001 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 AC009102.3-201ENST00000623118 1491 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 HBZP1-201ENST00000354915 429 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 HLA-F-220ENST00000434407 884 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
STAG1Q8WVM7 AC005082.1-201ENST00000413042 2259 ntBASIC21.8■■□□□ 1.08
STAG1Q8WVM7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 SPDYE13P-201ENST00000445314 798 ntBASIC21.79■■□□□ 1.08
STAG1Q8WVM7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 DBP-204ENST00000599385 709 ntTSL 3 BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
STAG1Q8WVM7 AL391807.1-203ENST00000604392 2365 ntBASIC21.79■■□□□ 1.08
STAG1Q8WVM7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 PCED1CP-201ENST00000419887 785 ntBASIC21.78■■□□□ 1.08
STAG1Q8WVM7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 AL136038.4-201ENST00000603606 1261 ntBASIC21.78■■□□□ 1.08
STAG1Q8WVM7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 AP000550.4-202ENST00000639755 178 ntBASIC21.78■■□□□ 1.08
STAG1Q8WVM7 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
STAG1Q8WVM7 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms