Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRAF3IP1Q8TDR0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AC112777.1-201ENST00000540175 1423 ntBASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AC073592.3-201ENST00000625118 1834 ntBASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRAF3IP1Q8TDR0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 AP003071.4-201ENST00000562276 1284 ntBASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 AP006294.2-201ENST00000641667 209 ntBASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRAF3IP1Q8TDR0 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 AL109659.2-201ENST00000606809 1674 ntBASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRAF3IP1Q8TDR0 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 MCCD1P1-208ENST00000445732 328 ntBASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 MIR4785-201ENST00000585005 73 ntBASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 AC008556.1-201ENST00000610908 2040 ntBASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
TRAF3IP1Q8TDR0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRAF3IP1Q8TDR0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms