Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 MTDHP5-201ENST00000598980 586 ntBASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 KRT8P50-201ENST00000562022 1438 ntBASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
ALMS1Q8TCU4 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 HLA-J-201ENST00000462773 1622 ntBASIC12.46□□□□□ -0.42
ALMS1Q8TCU4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 BEX3-201ENST00000361298 921 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 LAGE3P1-201ENST00000425356 484 ntBASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 MIR1199-201ENST00000621445 119 ntBASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ALMS1Q8TCU4 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 ANKRD20A8P-203ENST00000641373 517 ntBASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 RNA5SP416-201ENST00000516838 111 ntBASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC12.44□□□□□ -0.42
ALMS1Q8TCU4 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms