Protein–RNA interactions for Protein: Q8TBB1

LNX1, E3 ubiquitin-protein ligase LNX, humanhuman

Predicted RBP Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LNX1Q8TBB1 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.2■□□□□ 0.82
LNX1Q8TBB1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
LNX1Q8TBB1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.19■□□□□ 0.82
LNX1Q8TBB1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.19■□□□□ 0.82
LNX1Q8TBB1 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 ILF2-202ENST00000368681 726 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.18■□□□□ 0.82
LNX1Q8TBB1 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 STARP1-201ENST00000397973 869 ntBASIC20.17■□□□□ 0.82
LNX1Q8TBB1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 HYMAI.1-201ENST00000620949 238 ntBASIC20.17■□□□□ 0.82
LNX1Q8TBB1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 AC005332.1-201ENST00000577698 1310 ntBASIC20.17■□□□□ 0.82
LNX1Q8TBB1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 IER3-202ENST00000376377 1350 ntBASIC20.17■□□□□ 0.82
LNX1Q8TBB1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
LNX1Q8TBB1 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.16■□□□□ 0.82
LNX1Q8TBB1 AC112907.2-201ENST00000448639 330 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms