Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 AC112777.1-201ENST00000540175 1423 ntBASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 AL355802.2-201ENST00000402069 882 ntBASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 MYC-208ENST00000641036 567 ntBASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
BBS1Q8NFJ9 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AC239809.2-201ENST00000415381 517 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 KRT17P3-201ENST00000420566 1262 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AC004980.1-204ENST00000429707 299 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 KRT16P5-201ENST00000455284 522 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 PRSS44-201ENST00000515154 1146 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 RNA5SP413-201ENST00000516373 109 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AL445675.2-201ENST00000620291 557 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 REXO1L9P-201ENST00000604264 2108 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 RCC2P3-201ENST00000418112 1537 ntBASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
BBS1Q8NFJ9 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 LINC00896-202ENST00000609602 2128 ntBASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 AC008556.1-201ENST00000610908 2040 ntBASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
BBS1Q8NFJ9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms