Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 AC116562.4-202ENST00000641738 218 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 BICD1-207ENST00000551848 1962 ntBASIC17.37■□□□□ 0.37
NUP43Q8NFH3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
NUP43Q8NFH3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 TSPY15P-201ENST00000457163 923 ntBASIC17.36■□□□□ 0.37
NUP43Q8NFH3 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AC092338.2-201ENST00000568827 1415 ntBASIC17.36■□□□□ 0.37
NUP43Q8NFH3 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 AC036111.1-201ENST00000533973 1582 ntBASIC17.36■□□□□ 0.37
NUP43Q8NFH3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
NUP43Q8NFH3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 AP000593.1-201ENST00000393668 712 ntBASIC17.35■□□□□ 0.37
NUP43Q8NFH3 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 BX088651.1-201ENST00000540551 451 ntBASIC17.35■□□□□ 0.37
NUP43Q8NFH3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
NUP43Q8NFH3 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 AC007663.1-201ENST00000438948 1240 ntBASIC17.34■□□□□ 0.37
NUP43Q8NFH3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 AC093827.2-201ENST00000512654 315 ntBASIC17.34■□□□□ 0.37
NUP43Q8NFH3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.34■□□□□ 0.37
NUP43Q8NFH3 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms