Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CCDC63Q8NA47 AC084018.2-201ENST00000613093 2607 ntBASIC18.84■□□□□ 0.61
CCDC63Q8NA47 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CCDC63Q8NA47 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 AL121832.2-201ENST00000610979 668 ntBASIC18.83■□□□□ 0.6
CCDC63Q8NA47 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCDC63Q8NA47 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 SLC29A4P1-201ENST00000398760 971 ntBASIC18.82■□□□□ 0.6
CCDC63Q8NA47 AC006970.2-201ENST00000450065 779 ntBASIC18.82■□□□□ 0.6
CCDC63Q8NA47 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 AC083906.2-201ENST00000511578 360 ntBASIC18.82■□□□□ 0.6
CCDC63Q8NA47 IKBKGP1-201ENST00000612193 1073 ntBASIC18.82■□□□□ 0.6
CCDC63Q8NA47 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.82■□□□□ 0.6
CCDC63Q8NA47 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC63Q8NA47 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 CROCCP5-201ENST00000436658 830 ntBASIC18.81■□□□□ 0.6
CCDC63Q8NA47 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 AC092437.1-201ENST00000624794 1048 ntBASIC18.81■□□□□ 0.6
CCDC63Q8NA47 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC63Q8NA47 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms