Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC073912.3-201ENST00000624414 853 ntBASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 AC068587.9-201ENST00000641814 219 ntBASIC18.14■□□□□ 0.49
CPSF7Q8N684 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 KRT17P2-201ENST00000300992 1314 ntBASIC18.14■□□□□ 0.49
CPSF7Q8N684 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CPSF7Q8N684 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CPSF7Q8N684 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.13■□□□□ 0.49
CPSF7Q8N684 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CPSF7Q8N684 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 KRT16P5-201ENST00000455284 522 ntBASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AL160286.2-201ENST00000567150 934 ntBASIC18.12■□□□□ 0.49
CPSF7Q8N684 HTR7P1-201ENST00000538670 1336 ntBASIC18.12■□□□□ 0.49
CPSF7Q8N684 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC134043.2-201ENST00000624206 2238 ntBASIC18.12■□□□□ 0.49
CPSF7Q8N684 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.12■□□□□ 0.49
CPSF7Q8N684 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CPSF7Q8N684 AC093677.2-201ENST00000600169 1863 ntBASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms