Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AL671277.2-201ENST00000458060 996 ntBASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 KRT18P56-201ENST00000507275 550 ntBASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AC093458.2-201ENST00000623150 629 ntBASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 NEFHP1-201ENST00000412845 2629 ntBASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC33Q8N5R6 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 KRT18P38-201ENST00000449496 1282 ntBASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 AL121956.5-201ENST00000625261 221 ntBASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 IER3-202ENST00000376377 1350 ntBASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC33Q8N5R6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 PRSS44-201ENST00000515154 1146 ntBASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC33Q8N5R6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.42■□□□□ 0.7
CCDC33Q8N5R6 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms