Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 AC116407.4-201ENST00000623319 1061 ntBASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ARHGEF39Q8N4T4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 MIR662-201ENST00000384847 95 ntBASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 AL358472.4-201ENST00000633140 710 ntBASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARHGEF39Q8N4T4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 AC009065.1-201ENST00000564055 1225 ntBASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARHGEF39Q8N4T4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ARHGEF39Q8N4T4 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ARHGEF39Q8N4T4 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
ARHGEF39Q8N4T4 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ARHGEF39Q8N4T4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 AC009102.3-201ENST00000623118 1491 ntBASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 COPS8-203ENST00000409334 794 ntTSL 5 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
ARHGEF39Q8N4T4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms