Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 SLC23A2-204ENST00000468355 1934 ntTSL 1 (best)17.08■□□□□ 0.325e-6■□□□□ 11.1
SND1Q7KZF4 SLC23A2-203ENST00000423430 911 ntTSL 510.25□□□□□ -0.775e-6■□□□□ 11.1
SND1Q7KZF4 ENO1-202ENST00000464920 2266 ntTSL 1 (best)13.77□□□□□ -0.214e-34■□□□□ 11.1
SND1Q7KZF4 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.214e-34■□□□□ 11.1
SND1Q7KZF4 EIF3I-205ENST00000483517 744 ntTSL 513.54□□□□□ -0.247e-9■□□□□ 11.1
SND1Q7KZF4 EIF3I-202ENST00000373586 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.437e-9■□□□□ 11.1
SND1Q7KZF4 EIF3I-203ENST00000471486 825 ntTSL 211.4□□□□□ -0.587e-9■□□□□ 11.1
SND1Q7KZF4 EIF3I-204ENST00000474371 643 ntTSL 37.92□□□□□ -1.147e-9■□□□□ 11.1
SND1Q7KZF4 GPRC5C-203ENST00000392628 1529 ntAPPRIS ALT2 TSL 522.17■■□□□ 1.142e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-208ENST00000581590 1554 ntAPPRIS ALT2 TSL 521.68■■□□□ 1.062e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.932e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.96■□□□□ 0.792e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC17.27■□□□□ 0.362e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.182e-8■□□□□ 11.1
SND1Q7KZF4 GPRC5C-207ENST00000577663 2224 nt21.96■■□□□ 1.113e-12■□□□□ 11.1
SND1Q7KZF4 VIM-205ENST00000485947 1139 ntTSL 217.46■□□□□ 0.395e-29■□□□□ 11.1
SND1Q7KZF4 COLGALT1-203ENST00000597075 737 ntTSL 217.66■□□□□ 0.421e-6■□□□□ 11.1
SND1Q7KZF4 COLGALT1-204ENST00000597147 654 ntAPPRIS ALT2 TSL 514.35□□□□□ -0.111e-6■□□□□ 11.1
SND1Q7KZF4 GARS-208ENST00000485784 761 ntTSL 29.35□□□□□ -0.917e-11■□□□□ 11.1
SND1Q7KZF4 ATP13A1-208ENST00000474955 927 ntTSL 514.41□□□□□ -0.12e-7■□□□□ 11.1
SND1Q7KZF4 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.449e-8■□□□□ 11.1
SND1Q7KZF4 SDF4-205ENST00000465727 2095 ntTSL 222.07■■□□□ 1.129e-8■□□□□ 11.1
SND1Q7KZF4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.639e-8■□□□□ 11.1
SND1Q7KZF4 SLC38A3-204ENST00000445096 880 ntTSL 510.05□□□□□ -0.81e-7■□□□□ 11.1
SND1Q7KZF4 BCAT1-207ENST00000543099 568 ntTSL 47.08□□□□□ -1.282e-7■□□□□ 11.1
SND1Q7KZF4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.945e-7■□□□□ 11.1
SND1Q7KZF4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.714e-7■□□□□ 11.1
SND1Q7KZF4 ALDOC-202ENST00000395319 1519 ntTSL 5 BASIC12.81□□□□□ -0.364e-7■□□□□ 11.1
SND1Q7KZF4 ALDOC-203ENST00000395321 1722 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.434e-7■□□□□ 11.1
SND1Q7KZF4 RHBDD3-203ENST00000413137 1555 ntTSL 526.95■■□□□ 1.93e-6■□□□□ 11.1
SND1Q7KZF4 RHBDD3-204ENST00000414672 900 ntTSL 522.3■■□□□ 1.163e-6■□□□□ 11.1
SND1Q7KZF4 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.963e-6■□□□□ 11.1
SND1Q7KZF4 RHBDD3-207ENST00000496342 849 ntTSL 218.12■□□□□ 0.493e-6■□□□□ 11.1
SND1Q7KZF4 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.829e-14■□□□□ 11.1
SND1Q7KZF4 C4BPB-207ENST00000470767 652 ntTSL 29.85□□□□□ -0.838e-8■□□□□ 11
SND1Q7KZF4 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.614e-11■□□□□ 11
SND1Q7KZF4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.34e-11■□□□□ 11
SND1Q7KZF4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.244e-11■□□□□ 11
SND1Q7KZF4 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.12■□□□□ 0.174e-11■□□□□ 11
SND1Q7KZF4 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.084e-11■□□□□ 11
SND1Q7KZF4 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC14.34□□□□□ -0.114e-11■□□□□ 11
SND1Q7KZF4 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC13.84□□□□□ -0.194e-11■□□□□ 11
SND1Q7KZF4 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.194e-11■□□□□ 11
SND1Q7KZF4 SEPT9-205ENST00000427674 3937 ntTSL 1 (best) BASIC13.26□□□□□ -0.294e-11■□□□□ 11
SND1Q7KZF4 SEPT9-206ENST00000431235 4004 ntTSL 5 BASIC12.49□□□□□ -0.414e-11■□□□□ 11
SND1Q7KZF4 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.942e-35■□□□□ 11
SND1Q7KZF4 VDAC3-210ENST00000522178 272 ntTSL 311.25□□□□□ -0.611e-6■□□□□ 11
SND1Q7KZF4 SMIM7-201ENST00000358726 850 ntTSL 2 BASIC8.99□□□□□ -0.972e-6■□□□□ 11
SND1Q7KZF4 SMIM7-212ENST00000594507 430 ntTSL 38.29□□□□□ -1.082e-6■□□□□ 11
SND1Q7KZF4 SMIM7-203ENST00000461364 601 ntTSL 27.53□□□□□ -1.22e-6■□□□□ 11
SND1Q7KZF4 THBS1-202ENST00000397591 582 ntTSL 217.72■□□□□ 0.433e-13■□□□□ 11
SND1Q7KZF4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.38■■□□□ 1.014e-9■□□□□ 11
SND1Q7KZF4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.814e-9■□□□□ 11
SND1Q7KZF4 SREBF2-202ENST00000424354 5699 ntTSL 1 (best)15.39■□□□□ 0.054e-9■□□□□ 11
SND1Q7KZF4 HP-215ENST00000569639 568 ntTSL 4 BASIC13.16□□□□□ -0.34e-10■□□□□ 11
SND1Q7KZF4 HP-217ENST00000576168 1067 ntTSL 212.79□□□□□ -0.364e-10■□□□□ 11
SND1Q7KZF4 HP-214ENST00000568417 280 ntTSL 412.37□□□□□ -0.434e-10■□□□□ 11
SND1Q7KZF4 HP-206ENST00000562488 551 ntTSL 57.32□□□□□ -1.244e-10■□□□□ 11
SND1Q7KZF4 LAMA5-208ENST00000474128 579 ntTSL 317.87■□□□□ 0.455e-11■□□□□ 11
SND1Q7KZF4 CCT8-208ENST00000484403 808 ntTSL 39.3□□□□□ -0.921e-12■□□□□ 11
SND1Q7KZF4 CCT8-207ENST00000481059 879 ntTSL 56.82□□□□□ -1.321e-12■□□□□ 11
SND1Q7KZF4 SCAMP4-203ENST00000411971 783 ntTSL 516.97■□□□□ 0.315e-8■□□□□ 11
SND1Q7KZF4 SCAMP4-205ENST00000452128 718 ntTSL 216.59■□□□□ 0.255e-8■□□□□ 11
SND1Q7KZF4 SCAMP4-209ENST00000585335 432 ntTSL 515.22■□□□□ 0.035e-8■□□□□ 11
SND1Q7KZF4 SCAMP4-206ENST00000460767 569 ntTSL 413.97□□□□□ -0.175e-8■□□□□ 11
SND1Q7KZF4 SCAMP4-208ENST00000489554 573 ntTSL 310.85□□□□□ -0.675e-8■□□□□ 11
SND1Q7KZF4 MT-TF-201ENST00000387314 71 ntBASIC1.85□□□□□ -2.118e-80■□□□□ 11
SND1Q7KZF4 HIST1H2BC-202ENST00000396984 571 ntAPPRIS P1 BASIC11.39□□□□□ -0.593e-24■□□□□ 11
SND1Q7KZF4 HIST1H2BC-201ENST00000314332 659 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.753e-24■□□□□ 11
SND1Q7KZF4 CD55-210ENST00000634386 951 ntTSL 59.36□□□□□ -0.914e-7■□□□□ 11
SND1Q7KZF4 EPRS-203ENST00000468487 458 ntTSL 27.8□□□□□ -1.166e-8■□□□□ 11
SND1Q7KZF4 ANO10-207ENST00000428472 592 ntTSL 412.68□□□□□ -0.382e-7■□□□□ 11
SND1Q7KZF4 SLC26A6-220ENST00000489483 5682 ntTSL 216.23■□□□□ 0.199e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.44■□□□□ 0.069e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC15.06■□□□□ 09e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.079e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-201ENST00000307364 2586 ntTSL 1 (best)14.46□□□□□ -0.099e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-204ENST00000383733 2545 ntTSL 1 (best) BASIC14.27□□□□□ -0.139e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC14.25□□□□□ -0.139e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.159e-8■□□□□ 11
SND1Q7KZF4 SLC26A6-217ENST00000480524 2727 ntTSL 1 (best)13.92□□□□□ -0.189e-8■□□□□ 11
SND1Q7KZF4 HEPH-207ENST00000458621 838 ntTSL 210.06□□□□□ -0.81e-6■□□□□ 11
SND1Q7KZF4 ANPEP-202ENST00000558177 918 ntTSL 38.67□□□□□ -1.026e-10■□□□□ 11
SND1Q7KZF4 ANPEP-204ENST00000559761 469 ntTSL 27.87□□□□□ -1.156e-10■□□□□ 11
SND1Q7KZF4 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC25.42■■□□□ 1.662e-7■□□□□ 11
SND1Q7KZF4 FCGRT-208ENST00000595881 2681 ntTSL 222.71■■□□□ 1.232e-7■□□□□ 11
SND1Q7KZF4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.672e-7■□□□□ 11
SND1Q7KZF4 FCGRT-214ENST00000598927 1616 ntTSL 518.87■□□□□ 0.612e-7■□□□□ 11
SND1Q7KZF4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC18.66■□□□□ 0.582e-7■□□□□ 11
SND1Q7KZF4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.582e-7■□□□□ 11
SND1Q7KZF4 FCGRT-211ENST00000598076 676 ntTSL 314.06□□□□□ -0.162e-7■□□□□ 11
SND1Q7KZF4 A2M-210ENST00000542567 563 ntTSL 47.23□□□□□ -1.256e-76■□□□□ 11
SND1Q7KZF4 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC15.99■□□□□ 0.151e-6■□□□□ 11
SND1Q7KZF4 XPR1-202ENST00000367590 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.551e-6■□□□□ 11
SND1Q7KZF4 XPR1-205ENST00000498177 485 ntTSL 59.95□□□□□ -0.821e-6■□□□□ 11
SND1Q7KZF4 XPR1-203ENST00000464817 567 ntTSL 38□□□□□ -1.131e-6■□□□□ 11
SND1Q7KZF4 GART-201ENST00000361093 2149 ntTSL 1 (best) BASIC8.64□□□□□ -1.033e-9■□□□□ 11
SND1Q7KZF4 LAMB1-207ENST00000468999 764 ntTSL 211.7□□□□□ -0.547e-9■□□□□ 11
SND1Q7KZF4 PTGS1-201ENST00000223423 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.253e-6■□□□□ 11
SND1Q7KZF4 PTGS1-206ENST00000614910 4894 ntTSL 3 BASIC12.09□□□□□ -0.473e-6■□□□□ 11
Retrieved 100 of 13,567 protein–RNA pairs in 68.4 ms