Protein–RNA interactions for Protein: Q6YHK3

CD109, CD109 antigen, humanhuman

Predictions only

Length 1,445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD109Q6YHK3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CD109Q6YHK3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 MTDHP4-201ENST00000600287 670 ntBASIC28.11■■■□□ 2.09
CD109Q6YHK3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CD109Q6YHK3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC28.11■■■□□ 2.09
CD109Q6YHK3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CD109Q6YHK3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC28.1■■■□□ 2.09
CD109Q6YHK3 TCF3P1-201ENST00000423021 1937 ntBASIC28.1■■■□□ 2.09
CD109Q6YHK3 AC125634.1-201ENST00000438758 1403 ntBASIC28.1■■■□□ 2.09
CD109Q6YHK3 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CD109Q6YHK3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 MCCD1P2-201ENST00000423228 335 ntBASIC28.09■■■□□ 2.09
CD109Q6YHK3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 ALG1L5P-201ENST00000482043 771 ntBASIC28.09■■■□□ 2.09
CD109Q6YHK3 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
CD109Q6YHK3 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
CD109Q6YHK3 AC064836.3-201ENST00000607928 673 ntBASIC28.09■■■□□ 2.09
CD109Q6YHK3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CD109Q6YHK3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC28.08■■■□□ 2.09
CD109Q6YHK3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CD109Q6YHK3 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
CD109Q6YHK3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC28.08■■■□□ 2.09
CD109Q6YHK3 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CD109Q6YHK3 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CD109Q6YHK3 AC092364.2-202ENST00000597012 1073 ntBASIC28.08■■■□□ 2.09
CD109Q6YHK3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC28.08■■■□□ 2.09
CD109Q6YHK3 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
CD109Q6YHK3 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
CD109Q6YHK3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 CFL1-202ENST00000524553 860 ntTSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 NKAPP1-205ENST00000585790 367 ntBASIC28.07■■■□□ 2.08
CD109Q6YHK3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 FEM1AP3-201ENST00000403722 1741 ntBASIC28.07■■■□□ 2.08
CD109Q6YHK3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CD109Q6YHK3 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC28.07■■■□□ 2.08
CD109Q6YHK3 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CD109Q6YHK3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CD109Q6YHK3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.06■■■□□ 2.08
CD109Q6YHK3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CD109Q6YHK3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms