Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ATPAF1Q5TC12 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 AC004980.1-204ENST00000429707 299 ntBASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 AL031985.4-201ENST00000642138 673 ntBASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 ANO7L1-203ENST00000602586 1720 ntBASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
ATPAF1Q5TC12 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CD177P1-201ENST00000606252 935 ntBASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CR392000.1-201ENST00000624770 1228 ntBASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
ATPAF1Q5TC12 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.09■□□□□ 0.17
ATPAF1Q5TC12 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms