Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 AC007663.1-201ENST00000438948 1240 ntBASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERC4Q5GLZ8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
HERC4Q5GLZ8 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
HERC4Q5GLZ8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 AC104581.1-202ENST00000635932 2618 ntBASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
HERC4Q5GLZ8 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 MIR564-202ENST00000385049 94 ntBASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERC4Q5GLZ8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AC005082.1-201ENST00000413042 2259 ntBASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AC117947.1-201ENST00000427448 529 ntBASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERC4Q5GLZ8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC20.67■□□□□ 0.9
HERC4Q5GLZ8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms