Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC58Q4VC31 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC58Q4VC31 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AC097658.1-201ENST00000475555 843 ntBASIC16.58■□□□□ 0.24
CCDC58Q4VC31 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AL121832.2-201ENST00000610979 668 ntBASIC16.58■□□□□ 0.24
CCDC58Q4VC31 MIR5787-201ENST00000611784 55 ntBASIC16.58■□□□□ 0.24
CCDC58Q4VC31 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 RCC2P6-201ENST00000526625 1557 ntBASIC16.58■□□□□ 0.24
CCDC58Q4VC31 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AC008764.6-201ENST00000595909 2069 ntBASIC16.58■□□□□ 0.24
CCDC58Q4VC31 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CCDC58Q4VC31 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 MYC-209ENST00000641252 345 ntBASIC16.57■□□□□ 0.24
CCDC58Q4VC31 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CCDC58Q4VC31 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms