Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.77■□□□□ 0.27
RPS4XP62701 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
RPS4XP62701 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
RPS4XP62701 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS4XP62701 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 CYP2D8P-201ENST00000433633 1490 ntBASIC16.76■□□□□ 0.27
RPS4XP62701 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.76■□□□□ 0.27
RPS4XP62701 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.76■□□□□ 0.27
RPS4XP62701 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
RPS4XP62701 CA15P1-201ENST00000481698 905 ntBASIC16.76■□□□□ 0.27
RPS4XP62701 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.76■□□□□ 0.27
RPS4XP62701 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 AC010947.1-201ENST00000623454 693 ntBASIC16.76■□□□□ 0.27
RPS4XP62701 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS4XP62701 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.76■□□□□ 0.27
RPS4XP62701 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
RPS4XP62701 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
RPS4XP62701 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
RPS4XP62701 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS4XP62701 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
RPS4XP62701 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 AL023284.2-201ENST00000405850 579 ntBASIC16.75■□□□□ 0.27
RPS4XP62701 KRT18P57-201ENST00000443599 1254 ntBASIC16.75■□□□□ 0.27
RPS4XP62701 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.75■□□□□ 0.27
RPS4XP62701 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 C2orf69P3-201ENST00000565542 1120 ntBASIC16.75■□□□□ 0.27
RPS4XP62701 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RPS4XP62701 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RPS4XP62701 MYLKP1-201ENST00000509077 1580 ntBASIC16.75■□□□□ 0.27
RPS4XP62701 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.75■□□□□ 0.27
RPS4XP62701 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
RPS4XP62701 GPAT2P1-201ENST00000444924 1672 ntBASIC16.75■□□□□ 0.27
RPS4XP62701 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.75■□□□□ 0.27
RPS4XP62701 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
RPS4XP62701 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPS4XP62701 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS4XP62701 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPS4XP62701 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 SLC25A3P1-201ENST00000443844 931 ntBASIC16.74■□□□□ 0.27
RPS4XP62701 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 SLC25A1P4-201ENST00000567977 778 ntBASIC16.74■□□□□ 0.27
RPS4XP62701 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.74■□□□□ 0.27
RPS4XP62701 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
RPS4XP62701 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.74■□□□□ 0.27
RPS4XP62701 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
RPS4XP62701 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RPS4XP62701 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms