Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.66■□□□□ 0.58
AP1S1P61966 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
AP1S1P61966 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
AP1S1P61966 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
AP1S1P61966 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
AP1S1P61966 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.65■□□□□ 0.58
AP1S1P61966 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.65■□□□□ 0.58
AP1S1P61966 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.65■□□□□ 0.58
AP1S1P61966 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.65■□□□□ 0.58
AP1S1P61966 MIR1224-201ENST00000408193 85 ntBASIC18.65■□□□□ 0.58
AP1S1P61966 KRT18P38-201ENST00000449496 1282 ntBASIC18.65■□□□□ 0.58
AP1S1P61966 AC010331.1-201ENST00000611423 582 ntBASIC18.65■□□□□ 0.58
AP1S1P61966 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.65■□□□□ 0.58
AP1S1P61966 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 AL138781.2-201ENST00000617896 1843 ntBASIC18.65■□□□□ 0.58
AP1S1P61966 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP1S1P61966 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP1S1P61966 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP1S1P61966 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.64■□□□□ 0.57
AP1S1P61966 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.64■□□□□ 0.57
AP1S1P61966 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.64■□□□□ 0.57
AP1S1P61966 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.64■□□□□ 0.57
AP1S1P61966 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.64■□□□□ 0.57
AP1S1P61966 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.64■□□□□ 0.57
AP1S1P61966 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.64■□□□□ 0.57
AP1S1P61966 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 AC009102.3-201ENST00000623118 1491 ntBASIC18.64■□□□□ 0.57
AP1S1P61966 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP1S1P61966 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
AP1S1P61966 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP1S1P61966 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.63■□□□□ 0.57
AP1S1P61966 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.63■□□□□ 0.57
AP1S1P61966 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.63■□□□□ 0.57
AP1S1P61966 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP1S1P61966 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.63■□□□□ 0.57
AP1S1P61966 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
AP1S1P61966 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
AP1S1P61966 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.63■□□□□ 0.57
AP1S1P61966 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
AP1S1P61966 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 PVRIG2P-201ENST00000435460 978 ntBASIC18.62■□□□□ 0.57
AP1S1P61966 AC112907.2-201ENST00000448639 330 ntBASIC18.62■□□□□ 0.57
AP1S1P61966 NTF6B-201ENST00000591913 560 ntBASIC18.62■□□□□ 0.57
AP1S1P61966 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.62■□□□□ 0.57
AP1S1P61966 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.62■□□□□ 0.57
AP1S1P61966 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
AP1S1P61966 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 AC073592.3-201ENST00000625118 1834 ntBASIC18.62■□□□□ 0.57
AP1S1P61966 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.62■□□□□ 0.57
AP1S1P61966 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP1S1P61966 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms