Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.43■□□□□ 0.38
RAB38P57729 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
RAB38P57729 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RAB38P57729 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
RAB38P57729 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RAB38P57729 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 WIZP1-201ENST00000531444 2299 ntBASIC17.42■□□□□ 0.38
RAB38P57729 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
RAB38P57729 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
RAB38P57729 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB38P57729 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB38P57729 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB38P57729 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
RAB38P57729 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.42■□□□□ 0.38
RAB38P57729 HOMER2P1-201ENST00000455653 964 ntBASIC17.42■□□□□ 0.38
RAB38P57729 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB38P57729 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.42■□□□□ 0.38
RAB38P57729 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
RAB38P57729 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB38P57729 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
RAB38P57729 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB38P57729 AC126763.1-201ENST00000552015 2118 ntBASIC17.41■□□□□ 0.38
RAB38P57729 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 MIR149-201ENST00000384879 89 ntBASIC17.41■□□□□ 0.38
RAB38P57729 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
RAB38P57729 AC092647.4-201ENST00000457211 535 ntBASIC17.41■□□□□ 0.38
RAB38P57729 AC063952.2-201ENST00000498792 1227 ntBASIC17.41■□□□□ 0.38
RAB38P57729 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB38P57729 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB38P57729 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
RAB38P57729 AL157888.1-201ENST00000631930 593 ntBASIC17.41■□□□□ 0.38
RAB38P57729 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB38P57729 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.41■□□□□ 0.38
RAB38P57729 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB38P57729 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB38P57729 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB38P57729 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB38P57729 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RAB38P57729 AC073592.3-201ENST00000625118 1834 ntBASIC17.4■□□□□ 0.38
RAB38P57729 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB38P57729 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB38P57729 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB38P57729 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 STARP1-201ENST00000397973 869 ntBASIC17.4■□□□□ 0.38
RAB38P57729 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB38P57729 RASA4DP-201ENST00000460726 1199 ntBASIC17.4■□□□□ 0.38
RAB38P57729 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB38P57729 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RAB38P57729 AC022616.7-201ENST00000525383 220 ntBASIC17.4■□□□□ 0.38
RAB38P57729 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB38P57729 LINC01238-205ENST00000567549 1107 ntBASIC17.4■□□□□ 0.38
RAB38P57729 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB38P57729 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB38P57729 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RAB38P57729 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RAB38P57729 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RAB38P57729 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms