Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SUMO3P55854 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.79■□□□□ 0.28
SUMO3P55854 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.79■□□□□ 0.28
SUMO3P55854 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
SUMO3P55854 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.79■□□□□ 0.28
SUMO3P55854 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.79■□□□□ 0.28
SUMO3P55854 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC16.79■□□□□ 0.28
SUMO3P55854 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
SUMO3P55854 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SUMO3P55854 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
SUMO3P55854 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.79■□□□□ 0.28
SUMO3P55854 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SUMO3P55854 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SUMO3P55854 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 MIR3917-201ENST00000580971 93 ntBASIC16.78■□□□□ 0.28
SUMO3P55854 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SUMO3P55854 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.78■□□□□ 0.28
SUMO3P55854 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SUMO3P55854 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SUMO3P55854 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.77■□□□□ 0.28
SUMO3P55854 AL162741.1-201ENST00000565563 1558 ntBASIC16.77■□□□□ 0.28
SUMO3P55854 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.77■□□□□ 0.28
SUMO3P55854 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
SUMO3P55854 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SUMO3P55854 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.77■□□□□ 0.28
SUMO3P55854 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.77■□□□□ 0.28
SUMO3P55854 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SUMO3P55854 AL023973.1-201ENST00000624619 620 ntBASIC16.77■□□□□ 0.28
SUMO3P55854 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SUMO3P55854 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SUMO3P55854 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.77■□□□□ 0.27
SUMO3P55854 AC005082.1-201ENST00000413042 2259 ntBASIC16.77■□□□□ 0.27
SUMO3P55854 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SUMO3P55854 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SUMO3P55854 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SUMO3P55854 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
SUMO3P55854 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SUMO3P55854 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SUMO3P55854 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SUMO3P55854 AL020996.1-203ENST00000536896 2307 ntBASIC16.76■□□□□ 0.27
SUMO3P55854 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SUMO3P55854 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.76■□□□□ 0.27
SUMO3P55854 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.76■□□□□ 0.27
SUMO3P55854 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.76■□□□□ 0.27
SUMO3P55854 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.76■□□□□ 0.27
SUMO3P55854 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SUMO3P55854 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.76■□□□□ 0.27
SUMO3P55854 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms