Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 NIFKP9-201ENST00000419265 221 ntBASIC17.3■□□□□ 0.36
CDH12P55289 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH12P55289 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.3■□□□□ 0.36
CDH12P55289 C1QBPP2-201ENST00000528754 825 ntBASIC17.3■□□□□ 0.36
CDH12P55289 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.3■□□□□ 0.36
CDH12P55289 AC131212.4-201ENST00000623606 975 ntBASIC17.3■□□□□ 0.36
CDH12P55289 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CDH12P55289 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
CDH12P55289 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CDH12P55289 AC008764.6-201ENST00000595909 2069 ntBASIC17.3■□□□□ 0.36
CDH12P55289 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH12P55289 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDH12P55289 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH12P55289 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH12P55289 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 HTR7P1-201ENST00000538670 1336 ntBASIC17.29■□□□□ 0.36
CDH12P55289 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH12P55289 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH12P55289 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH12P55289 POU5F1P3-201ENST00000428824 1078 ntBASIC17.29■□□□□ 0.36
CDH12P55289 AC004980.1-204ENST00000429707 299 ntBASIC17.29■□□□□ 0.36
CDH12P55289 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 AP002982.1-201ENST00000492365 877 ntBASIC17.29■□□□□ 0.36
CDH12P55289 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH12P55289 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.29■□□□□ 0.36
CDH12P55289 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC17.29■□□□□ 0.36
CDH12P55289 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH12P55289 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDH12P55289 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH12P55289 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH12P55289 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH12P55289 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH12P55289 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 RPS2P4-201ENST00000476944 856 ntBASIC17.28■□□□□ 0.36
CDH12P55289 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 AC068587.9-201ENST00000641814 219 ntBASIC17.28■□□□□ 0.36
CDH12P55289 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 AC135776.1-201ENST00000319817 2481 ntBASIC17.28■□□□□ 0.36
CDH12P55289 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 KRT8P11-201ENST00000409686 1436 ntBASIC17.28■□□□□ 0.36
CDH12P55289 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH12P55289 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH12P55289 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CDH12P55289 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms