Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AP003041.3-201ENST00000527151 707 ntBASIC18.34■□□□□ 0.53
CDKN2DP55273 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CDKN2DP55273 FITM1-202ENST00000559294 800 ntBASIC18.34■□□□□ 0.53
CDKN2DP55273 AP006294.2-201ENST00000641667 209 ntBASIC18.34■□□□□ 0.53
CDKN2DP55273 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
CDKN2DP55273 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CDKN2DP55273 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN2DP55273 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
CDKN2DP55273 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.33■□□□□ 0.53
CDKN2DP55273 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN2DP55273 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CDKN2DP55273 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKN2DP55273 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CDKN2DP55273 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.33■□□□□ 0.52
CDKN2DP55273 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 MIR1238-201ENST00000408483 83 ntBASIC18.33■□□□□ 0.52
CDKN2DP55273 SLC25A1P2-201ENST00000430693 912 ntBASIC18.33■□□□□ 0.52
CDKN2DP55273 TSPY15P-201ENST00000457163 923 ntBASIC18.33■□□□□ 0.52
CDKN2DP55273 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKN2DP55273 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
CDKN2DP55273 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.33■□□□□ 0.52
CDKN2DP55273 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKN2DP55273 AC093677.2-201ENST00000600169 1863 ntBASIC18.33■□□□□ 0.52
CDKN2DP55273 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CDKN2DP55273 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.33■□□□□ 0.52
CDKN2DP55273 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKN2DP55273 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
CDKN2DP55273 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CDKN2DP55273 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKN2DP55273 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKN2DP55273 AL353719.1-201ENST00000566847 864 ntBASIC18.32■□□□□ 0.52
CDKN2DP55273 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.32■□□□□ 0.52
CDKN2DP55273 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.32■□□□□ 0.52
CDKN2DP55273 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.32■□□□□ 0.52
CDKN2DP55273 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
CDKN2DP55273 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CDKN2DP55273 AC092338.2-201ENST00000568827 1415 ntBASIC18.32■□□□□ 0.52
CDKN2DP55273 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CDKN2DP55273 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CDKN2DP55273 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 AP000593.1-201ENST00000393668 712 ntBASIC18.31■□□□□ 0.52
CDKN2DP55273 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2DP55273 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKN2DP55273 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.31■□□□□ 0.52
CDKN2DP55273 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.31■□□□□ 0.52
CDKN2DP55273 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2DP55273 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.31■□□□□ 0.52
CDKN2DP55273 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CDKN2DP55273 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CDKN2DP55273 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2DP55273 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CDKN2DP55273 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2DP55273 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CDKN2DP55273 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms