Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.29■□□□□ 0.84
NCKAP1LP55160 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NCKAP1LP55160 AC009102.3-201ENST00000623118 1491 ntBASIC20.29■□□□□ 0.84
NCKAP1LP55160 SDHAP2-201ENST00000455183 2001 ntBASIC20.29■□□□□ 0.84
NCKAP1LP55160 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 HYMAI.1-201ENST00000620949 238 ntBASIC20.28■□□□□ 0.84
NCKAP1LP55160 AC079602.3-201ENST00000623931 403 ntBASIC20.28■□□□□ 0.84
NCKAP1LP55160 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NCKAP1LP55160 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
NCKAP1LP55160 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.27■□□□□ 0.84
NCKAP1LP55160 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 LINC01238-205ENST00000567549 1107 ntBASIC20.27■□□□□ 0.84
NCKAP1LP55160 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NCKAP1LP55160 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.27■□□□□ 0.84
NCKAP1LP55160 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
NCKAP1LP55160 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 PVRIG2P-201ENST00000435460 978 ntBASIC20.26■□□□□ 0.83
NCKAP1LP55160 AC112907.2-201ENST00000448639 330 ntBASIC20.26■□□□□ 0.83
NCKAP1LP55160 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.26■□□□□ 0.83
NCKAP1LP55160 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.26■□□□□ 0.83
NCKAP1LP55160 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NCKAP1LP55160 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.25■□□□□ 0.83
NCKAP1LP55160 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NCKAP1LP55160 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms