Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.6□□□□□ -0.23
APOC4P55056 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC13.6□□□□□ -0.23
APOC4P55056 AC069148.1-201ENST00000608741 768 ntBASIC13.6□□□□□ -0.23
APOC4P55056 AC083849.1-201ENST00000615227 514 ntBASIC13.6□□□□□ -0.23
APOC4P55056 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC13.6□□□□□ -0.23
APOC4P55056 AL157888.1-201ENST00000631930 593 ntBASIC13.6□□□□□ -0.23
APOC4P55056 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 AC083906.6-201ENST00000641366 219 ntBASIC13.6□□□□□ -0.23
APOC4P55056 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
APOC4P55056 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 AC005332.1-201ENST00000577698 1310 ntBASIC13.6□□□□□ -0.23
APOC4P55056 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
APOC4P55056 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
APOC4P55056 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.59□□□□□ -0.23
APOC4P55056 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
APOC4P55056 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC13.59□□□□□ -0.23
APOC4P55056 CBFB-203ENST00000561924 584 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 AL136038.4-201ENST00000603606 1261 ntBASIC13.59□□□□□ -0.23
APOC4P55056 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
APOC4P55056 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 CYP51A1P1-201ENST00000492267 1507 ntBASIC13.59□□□□□ -0.23
APOC4P55056 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC13.59□□□□□ -0.23
APOC4P55056 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC13.59□□□□□ -0.23
APOC4P55056 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOC4P55056 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
APOC4P55056 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
APOC4P55056 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.58□□□□□ -0.23
APOC4P55056 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
APOC4P55056 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.23
APOC4P55056 Z98044.1-201ENST00000632503 1764 ntBASIC13.58□□□□□ -0.23
APOC4P55056 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC4P55056 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 AC005332.7-201ENST00000614046 2005 ntBASIC13.58□□□□□ -0.24
APOC4P55056 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
APOC4P55056 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC4P55056 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC4P55056 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC4P55056 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC4P55056 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC4P55056 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC4P55056 AC116407.4-201ENST00000623319 1061 ntBASIC13.58□□□□□ -0.24
APOC4P55056 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC13.58□□□□□ -0.24
APOC4P55056 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.58□□□□□ -0.24
APOC4P55056 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC4P55056 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
APOC4P55056 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.58□□□□□ -0.24
APOC4P55056 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms