Protein–RNA interactions for Protein: P55008

AIF1, Allograft inflammatory factor 1, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AIF1P55008 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.12■□□□□ 0.65
AIF1P55008 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 COX11P1-201ENST00000489116 835 ntBASIC19.12■□□□□ 0.65
AIF1P55008 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 AC009113.1-201ENST00000570267 2443 ntBASIC19.12■□□□□ 0.65
AIF1P55008 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.12■□□□□ 0.65
AIF1P55008 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.12■□□□□ 0.65
AIF1P55008 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AIF1P55008 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
AIF1P55008 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
AIF1P55008 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.11■□□□□ 0.65
AIF1P55008 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
AIF1P55008 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 MIR3917-201ENST00000580971 93 ntBASIC19.11■□□□□ 0.65
AIF1P55008 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.11■□□□□ 0.65
AIF1P55008 AC024243.1-201ENST00000609234 778 ntBASIC19.11■□□□□ 0.65
AIF1P55008 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
AIF1P55008 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.11■□□□□ 0.65
AIF1P55008 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.11■□□□□ 0.65
AIF1P55008 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.11■□□□□ 0.65
AIF1P55008 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
AIF1P55008 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AIF1P55008 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
AIF1P55008 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.1■□□□□ 0.65
AIF1P55008 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
AIF1P55008 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 AC034232.1-201ENST00000506026 1064 ntBASIC19.1■□□□□ 0.65
AIF1P55008 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC19.1■□□□□ 0.65
AIF1P55008 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.1■□□□□ 0.65
AIF1P55008 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.1■□□□□ 0.65
AIF1P55008 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.1■□□□□ 0.65
AIF1P55008 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.1■□□□□ 0.65
AIF1P55008 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.1■□□□□ 0.65
AIF1P55008 SDHAP2-201ENST00000455183 2001 ntBASIC19.1■□□□□ 0.65
AIF1P55008 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AIF1P55008 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
AIF1P55008 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.09■□□□□ 0.65
AIF1P55008 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.09■□□□□ 0.65
AIF1P55008 AC005521.1-201ENST00000393351 872 ntBASIC19.09■□□□□ 0.65
AIF1P55008 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.09■□□□□ 0.65
AIF1P55008 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 PPOX-219ENST00000544598 813 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 AC140113.3-201ENST00000605663 199 ntBASIC19.09■□□□□ 0.65
AIF1P55008 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
AIF1P55008 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
AIF1P55008 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.09■□□□□ 0.65
AIF1P55008 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
AIF1P55008 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms