Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CACNA2D1P54289 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
CACNA2D1P54289 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 SPDYE13P-201ENST00000445314 798 ntBASIC19.65■□□□□ 0.74
CACNA2D1P54289 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 AL157888.1-201ENST00000631930 593 ntBASIC19.65■□□□□ 0.74
CACNA2D1P54289 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 HOXB1-202ENST00000577092 1414 ntBASIC19.65■□□□□ 0.74
CACNA2D1P54289 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CACNA2D1P54289 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.65■□□□□ 0.74
CACNA2D1P54289 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D1P54289 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D1P54289 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D1P54289 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.64■□□□□ 0.74
CACNA2D1P54289 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CACNA2D1P54289 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.64■□□□□ 0.73
CACNA2D1P54289 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 AC079602.3-201ENST00000623931 403 ntBASIC19.64■□□□□ 0.73
CACNA2D1P54289 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 AC034236.2-201ENST00000606662 1610 ntBASIC19.64■□□□□ 0.73
CACNA2D1P54289 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CACNA2D1P54289 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CACNA2D1P54289 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 AL358472.4-201ENST00000633140 710 ntBASIC19.63■□□□□ 0.73
CACNA2D1P54289 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CACNA2D1P54289 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.63■□□□□ 0.73
CACNA2D1P54289 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 AL499627.1-201ENST00000569373 2188 ntBASIC19.62■□□□□ 0.73
CACNA2D1P54289 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.62■□□□□ 0.73
CACNA2D1P54289 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CACNA2D1P54289 FAM86EP-206ENST00000510506 987 ntBASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms