Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PDX1P52945 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.99■□□□□ 0.47
PDX1P52945 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.99■□□□□ 0.47
PDX1P52945 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
PDX1P52945 UNC93B7-201ENST00000509439 705 ntBASIC17.99■□□□□ 0.47
PDX1P52945 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.99■□□□□ 0.47
PDX1P52945 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.99■□□□□ 0.47
PDX1P52945 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.99■□□□□ 0.47
PDX1P52945 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PDX1P52945 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PDX1P52945 AC112497.1-201ENST00000624824 639 ntBASIC17.99■□□□□ 0.47
PDX1P52945 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.99■□□□□ 0.47
PDX1P52945 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.99■□□□□ 0.47
PDX1P52945 AC093525.10-201ENST00000625130 1569 ntBASIC17.99■□□□□ 0.47
PDX1P52945 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.99■□□□□ 0.47
PDX1P52945 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
PDX1P52945 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.99■□□□□ 0.47
PDX1P52945 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.98■□□□□ 0.47
PDX1P52945 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.98■□□□□ 0.47
PDX1P52945 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.98■□□□□ 0.47
PDX1P52945 KRT8P26-201ENST00000534154 1276 ntBASIC17.98■□□□□ 0.47
PDX1P52945 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.98■□□□□ 0.47
PDX1P52945 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.98■□□□□ 0.47
PDX1P52945 MIR3917-201ENST00000580971 93 ntBASIC17.98■□□□□ 0.47
PDX1P52945 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 AL136038.4-201ENST00000603606 1261 ntBASIC17.98■□□□□ 0.47
PDX1P52945 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC17.98■□□□□ 0.47
PDX1P52945 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
PDX1P52945 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PDX1P52945 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.97■□□□□ 0.47
PDX1P52945 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.97■□□□□ 0.47
PDX1P52945 AC111152.3-201ENST00000569699 673 ntBASIC17.97■□□□□ 0.47
PDX1P52945 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
PDX1P52945 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PDX1P52945 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 AL391807.1-203ENST00000604392 2365 ntBASIC17.97■□□□□ 0.47
PDX1P52945 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.97■□□□□ 0.47
PDX1P52945 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PDX1P52945 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.97■□□□□ 0.47
PDX1P52945 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 TEX21P-204ENST00000641479 1693 ntBASIC17.96■□□□□ 0.47
PDX1P52945 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.96■□□□□ 0.47
PDX1P52945 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
PDX1P52945 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
PDX1P52945 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.96■□□□□ 0.47
PDX1P52945 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms