Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.97■□□□□ 0.47
CLCN2P51788 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.97■□□□□ 0.47
CLCN2P51788 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN2P51788 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN2P51788 AC073592.3-201ENST00000625118 1834 ntBASIC17.97■□□□□ 0.47
CLCN2P51788 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN2P51788 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN2P51788 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.97■□□□□ 0.47
CLCN2P51788 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
CLCN2P51788 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLCN2P51788 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 AC124067.4-201ENST00000519691 2379 ntBASIC17.96■□□□□ 0.47
CLCN2P51788 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN2P51788 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN2P51788 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.96■□□□□ 0.47
CLCN2P51788 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 LINC00896-202ENST00000609602 2128 ntBASIC17.96■□□□□ 0.47
CLCN2P51788 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.96■□□□□ 0.47
CLCN2P51788 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLCN2P51788 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
CLCN2P51788 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLCN2P51788 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN2P51788 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN2P51788 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLCN2P51788 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN2P51788 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN2P51788 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN2P51788 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN2P51788 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLCN2P51788 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLCN2P51788 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 AC004951.3-201ENST00000418645 1148 ntBASIC17.95■□□□□ 0.46
CLCN2P51788 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN2P51788 AC011506.1-201ENST00000474329 610 ntBASIC17.95■□□□□ 0.46
CLCN2P51788 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.95■□□□□ 0.46
CLCN2P51788 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.95■□□□□ 0.46
CLCN2P51788 DGCR10-201ENST00000609839 495 ntBASIC17.95■□□□□ 0.46
CLCN2P51788 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CLCN2P51788 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLCN2P51788 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.95■□□□□ 0.46
CLCN2P51788 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 RCC2P6-201ENST00000526625 1557 ntBASIC17.95■□□□□ 0.46
CLCN2P51788 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.95■□□□□ 0.46
CLCN2P51788 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLCN2P51788 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.95■□□□□ 0.46
CLCN2P51788 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CLCN2P51788 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.94■□□□□ 0.46
CLCN2P51788 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 MMP23A-201ENST00000234610 1017 ntBASIC17.94■□□□□ 0.46
CLCN2P51788 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLCN2P51788 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLCN2P51788 MESTP1-201ENST00000404287 994 ntBASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms